Applications: DNA Sequencing, Gene Regulation Analysis, Sequencing-Based Transcriptome Analysis, SNP Discovery and Structural Variation Analysis, Cytogenetic Analysis, DNA-Protein Interaction Analysis (ChIP-Seq), Sequencing-Based Methylation Analysis, Small RNA Discovery and Analysis
Illumina's Genome AnalyzerIIe offers a powerful combination of accuracy, read lengths, and paired-end insert sizes at a price that is accessible to labs of any size. Illumina’s proven sequencing by synthesis technology is delivered with the streamlined workflow and unmatched performance that has made it the most widely adopted platform worldwide. More...
The combination of both short and long insert paired end sequencing, coupled with 2 × 100 base read lengths, greatly expands the available range of applications. The Genome AnalyzerIIe is well-suited for many low- to medium-output applications, including de novo sequencing, resequencing of small- to medium-sized genomes, RNA and small RNA sequencing, ChIP-seq, and metagenomics studies. Illumina offers a complete software solution and partners with numerous third-party vendors to help streamline data analysis and allow researchers to discover meaningful results faster and easier.
The Genome AnalyzerIIe enables limitless discovery through a broad range of applications, unrivaled performance, and a price that works for your research.
The Genome AnalyzerIIe sequencing workflow is based on three simple steps. Libraries can be prepared from virtually any nucleic acid sample in less than six hours with standardized, ready-to-use kits. Clonal amplification takes less than four hours, with less than 10 minutes of hands-on time, using the fully automated, emulsion PCR-free cBot cluster generation system. Sequencing is performed inside flow cells using standard sequencing reagents.

Illumina proudly offers system and analysis software designed to maximize your data quality and throughput level. Each instrument includes system control software designed for optimal performance. Data can be analyzed using Illumina's user-friendly GenomeStudio software or a third-party package.
Illumina's Customer Solutions Team is dedicated to providing you with the resources you need to support your research. Scientists specializing in Illumina's technologies, scientific applications, software, and hardware systems are available even before your first system purchase. Field Service Engineers expertly install and qualify your instrument to guarantee a fully functional system. Field Application Scientists offer extensive training, enabling labs to quickly become proficient at generating industry-leading data quality at unparalleled throughput levels. Technical Support Scientists are just a phone call or email away and can help you plan your project, diagnose a problem, and interpret results.
We strive to continuously exceed your expectations, so that you can maximize the impact of Illumina technology in your lab. For more information, visit our Support section